| 2019 | | Limmen Bight Marine Park Draft Plan of Management (October 2019) |
| 2019 | | Response to consultation on the near coastal qualifications review and proposed Marine Order 5065 (Certificates of competency - national law) 2019 (September 2019) |
| 2019 | | Stromlo-1 Exploration Drilling Program Draft Environmental Plan (March 2019) |
| 2019 | | Marine National Facility Access Framework (February 2019) |
| 2018 | | Australia's Strategy for Nature 2018-2030 (March 2018) |
| 2017 | | Commonwealth Marine Reserves Draft Plans 2017 (September 2017) |
| 2017 | | Marine Pest Plan 2017-2022 (v2.0) (June 2017) |
| 2017 | | Innovation and Science Australia 2030 Strategic Plan Issues Paper (May 2017) |
| 2017 | | Draft 2016 National Research Infrastructure Roadmap (January 2017) |
| 2016 | | Current and future impacts of climate change on marine fisheries and biodiversity (November 2016) |
| 2016 | | National Research Infrastructure Roadmap Capability Issues Paper (September 2016) |
| 2015 | | Commonwealth Marine Reserves Review Committee (April 2015) |
| 2014 | | IMOS Strategy 2015-25 Plan (May 2014) |
| 2014 | | Draft National Environment and Community Biosecurity RD&E Strategy 2014-2017 (May 2014) |
| 2012 | | House of Representatives Inquiry into the role of science for fisheries & aquaculture (May 2012) |
| 2012 | | Australian biofouling management requirements (RIS) (February 2012) |
| 2012 | | Marine Bioregional Plan for the Temperate East marine region (February 2012) |
| 2011 | | Marine Bioregional Plan for the North-west marine region (November 2011) |
| 2011 | | Marine Bioregional Plan for the North marine region (November 2011) |
| 2011 | | South-west Commonwealth marine reserve network (August 2011) |
| 2011 | | Inquiry into Australia's Biodiversity in a Changing Climate (July 2011) |
| 2009 | | Review of the National Biodiversity Strategy, Australia's Biodiversity Conservation Strategy 2010-2020 (May 2009) |
| 2007 | | AMSA-ACRS MPA Consensus Statement (September 2007) |
| 2006 | | Science and Innovation Study (July 2006) |
| 2006 | | Senate MPA Inquiry (March 2006) |
| 2006 | | South East Marine Regional Plan (March 2006) |
| 2005 | | Marine Taxonomy in the New Millennium: A Discussion Paper for the Oceans Policy Science Advisory Group (April 2005) |
| 2005 | | Draft Implementation Framework for the National Collaborative Research Infrastructure Strategy (April 2005) |
| 2005 | | Draft Strategic Assessment of Offshore Petroleum Exploration and Appraisal Activities (April 2005) |
| 2003 | | Great Barrier Reef Marine Park Draft Zoning Plan (August 2003) |
| 2002 | | National Research Priorities (August 2002) |